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Added some cancer genomics resources.

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Will Oemler 2016-01-31 08:10:01 -05:00
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@ -27,6 +27,7 @@ Biology
* `1000 Genomes <http://www.1000genomes.org/data>`_ * `1000 Genomes <http://www.1000genomes.org/data>`_
* `American Gut (Microbiome Project) <https://github.com/biocore/American-Gut>`_ * `American Gut (Microbiome Project) <https://github.com/biocore/American-Gut>`_
* `Broad Cancer Cell Line Encyclopedia (CCLE) <http://www.broadinstitute.org/ccle/home>`_
* `Cell Image Library <http://www.cellimagelibrary.org>`_ * `Cell Image Library <http://www.cellimagelibrary.org>`_
* `Collaborative Research in Computational Neuroscience (CRCNS) <http://crcns.org/data-sets>`_ * `Collaborative Research in Computational Neuroscience (CRCNS) <http://crcns.org/data-sets>`_
* `EBI ArrayExpress <http://www.ebi.ac.uk/arrayexpress/>`_ * `EBI ArrayExpress <http://www.ebi.ac.uk/arrayexpress/>`_
@ -47,10 +48,13 @@ Biology
* `Protein Data Bank <http://www.rcsb.org/>`_ * `Protein Data Bank <http://www.rcsb.org/>`_
* `PubChem Project <https://pubchem.ncbi.nlm.nih.gov/>`_ * `PubChem Project <https://pubchem.ncbi.nlm.nih.gov/>`_
* `PubGene (now Coremine Medical) <http://www.pubgene.org/>`_ * `PubGene (now Coremine Medical) <http://www.pubgene.org/>`_
* `Sanger Catalogue of Somatic Mutations in Cancer (COSMIC) <http://cancer.sanger.ac.uk/cosmic>`_
* `Sanger Genomics of Drug Sensitivity in Cancer Project (GDSC) <http://www.cancerrxgene.org/>`_
* `Sequence Read Archive(SRA) <http://www.ncbi.nlm.nih.gov/Traces/sra/>`_ * `Sequence Read Archive(SRA) <http://www.ncbi.nlm.nih.gov/Traces/sra/>`_
* `Stanford Microarray Data <http://smd.stanford.edu/>`_ * `Stanford Microarray Data <http://smd.stanford.edu/>`_
* `Stowers Institute Original Data Repository <http://www.stowers.org/research/publications/odr>`_ * `Stowers Institute Original Data Repository <http://www.stowers.org/research/publications/odr>`_
* `Systems Science of Biological Dynamics (SSBD) Database <http://ssbd.qbic.riken.jp>`_ * `Systems Science of Biological Dynamics (SSBD) Database <http://ssbd.qbic.riken.jp>`_
* `The Cancer Genome Atlas (TCGA), available via Broad GDAC <https://gdac.broadinstitute.org/>`_
* `The Catalogue of Life <http://www.catalogueoflife.org/content/annual-checklist-archive>`_ * `The Catalogue of Life <http://www.catalogueoflife.org/content/annual-checklist-archive>`_
* `The Personal Genome Project <http://www.personalgenomes.org/>`_ or `PGP <https://my.pgp-hms.org/public_genetic_data>`_ * `The Personal Genome Project <http://www.personalgenomes.org/>`_ or `PGP <https://my.pgp-hms.org/public_genetic_data>`_
* `UCSC Public Data <http://hgdownload.soe.ucsc.edu/downloads.html>`_ * `UCSC Public Data <http://hgdownload.soe.ucsc.edu/downloads.html>`_