From 52610b2cf6823f4118a9a339755e28df3d542dcd Mon Sep 17 00:00:00 2001
From: Kirito <1362050620@qq.com>
Date: Tue, 2 Aug 2016 13:13:00 +0800
Subject: [PATCH] Create 1080.cpp

---
 HDOJ/1080.cpp | 67 +++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 67 insertions(+)
 create mode 100644 HDOJ/1080.cpp

diff --git a/HDOJ/1080.cpp b/HDOJ/1080.cpp
new file mode 100644
index 0000000..177e5b4
--- /dev/null
+++ b/HDOJ/1080.cpp
@@ -0,0 +1,67 @@
+#include <cstdio>
+#include <cstdlib>
+#include <cstring>
+#include <algorithm>
+using namespace std;
+char stra[128];
+char strb[128];
+#define MAXL 105
+int dp[MAXL][MAXL];
+int label(char c)
+{
+    switch(c)
+    {
+        case 'A': return 0;
+        case 'C': return 1;
+        case 'G': return 2;
+        case 'T': return 3;
+        case '-': return 4;
+        default: return 4;/// Here if c=='\0' , we should regard it as a '-';
+    }
+}
+int trans[5][5]=
+{
+    {
+        5,-1,-2,-1,-3
+    },
+    {
+        -1,5,-3,-2,-4
+    },
+    {
+        -2,-3,5,-2,-2
+    },
+    {
+        -1,-2,-2,5,-1
+    },
+    {
+        -3,-4,-2,-1,0
+    }
+};
+int main()
+{
+    int t;
+    scanf("%d",&t);
+    while(t--)
+    {
+        int a,b;
+        scanf("%d %s %d %s",&a,stra+1,&b,strb+1);
+        memset(dp,0,sizeof(int)*MAXL*MAXL);
+        /// Init this dp array (Why?)
+        int n=max(a,b);
+        for(int ci=1;ci<=n;ci++)
+        {
+            dp[0][ci]=dp[0][ci-1]+trans[label('-')][label(strb[ci])];
+            dp[ci][0]=dp[ci-1][0]+trans[label(stra[ci])][label('-')];
+        }
+
+        for(int i=1;i<=a;i++)
+        {
+            for(int j=1;j<=b;j++)
+            {
+                dp[i][j]=max(max(dp[i-1][j]+trans[label(stra[i])][label('-')],dp[i][j-1]+trans[label('-')][label(strb[j])]),dp[i-1][j-1]+trans[label(stra[i])][label(strb[j])]);
+            }
+        }
+        printf("%d\n",dp[a][b]);
+    }
+    return 0;
+}